STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMPCathelicidin antimicrobial peptide. (169 aa)    
Predicted Functional Partners:
G3TVU3_LOXAF
Uncharacterized protein.
   
 
 0.946
NFKB1
Nuclear factor kappa B subunit 1.
   
 
 0.919
G3TU61_LOXAF
Uncharacterized protein.
  
  
 
0.906
RELA
RELA proto-oncogene, NF-kB subunit.
   
 
 0.906
JUN
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
     
 0.903
ELANE
Elastase, neutrophil expressed; Belongs to the peptidase S1 family.
   
 
 0.719
TLR9
TIR domain-containing protein.
   
 
 0.652
S100A12
Protein S100; Belongs to the S-100 family.
   
 
 0.564
S100A9
Protein S100; Belongs to the S-100 family.
   
 
 0.551
G3T7A6_LOXAF
Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity.
   
  
 0.537
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.