STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AASSAminoadipate-semialdehyde synthase. (925 aa)    
Predicted Functional Partners:
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
   
 0.966
ALDH7A1
Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family.
  
 
 0.929
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.898
BTD
Biotinidase.
  
 
 0.887
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.884
ETNPPL
Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.801
AASDHPPT
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
  
  
 0.763
VNN1
CN hydrolase domain-containing protein.
  
 
 0.722
G3TT93_LOXAF
CN hydrolase domain-containing protein.
  
 
 0.722
TRMT112
tRNA methyltransferase subunit 11-2.
    
 
 0.714
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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