STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100665293Ig-like domain-containing protein. (266 aa)    
Predicted Functional Partners:
LOC100664409
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
0.829
CD74
CD74 molecule.
   
 0.821
HLA-DMA
Major histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family.
   
 0.799
LOC100662176
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
0.738
G3SUW7_LOXAF
Ig-like domain-containing protein.
   
0.718
HLA-DOA
Major histocompatibility complex, class II, DO alpha; Belongs to the MHC class II family.
   
0.716
G3SMT7_LOXAF
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
0.656
G3SUJ2_LOXAF
Uncharacterized protein.
   
 0.656
LOC100667002
Uncharacterized protein.
   
 0.656
G3UG43_LOXAF
Ig-like domain-containing protein.
   
0.656
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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