Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKAP8LA-kinase anchoring protein 8 like; Belongs to the AKAP95 family. (636 aa)    
Predicted Functional Partners:
GPATCH8
G-patch domain containing 8.
   
  
 0.811
ABCC5
ATP binding cassette subfamily C member 5.
    
   0.767
NUDCD1
NudC domain containing 1.
    
   0.764
HIF1AN
Hypoxia inducible factor 1 subunit alpha inhibitor.
   
  
 0.728
DHX9
DExH-box helicase 9.
   
 
 0.723
RNF43
RING-type domain-containing protein.
    
 
 0.633
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 
 0.548
TMPO
Thymopoietin.
    
   0.540
C12orf43
Chromosome 12 open reading frame 43.
      
 0.532
TP53BP1
Tumor protein p53 binding protein 1.
    
 
 0.513
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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