STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMC5Transmembrane channel-like protein. (966 aa)    
Predicted Functional Partners:
ZNF683
Zinc finger protein 683.
    
 0.668
SPATS1
Spermatogenesis associated serine rich 1.
      
 0.637
RASA1
RAS p21 protein activator 1.
    
 
 0.629
SKIV2L
Ski2 like RNA helicase.
    
 0.628
SYNGR2
MARVEL domain-containing protein.
      
 0.626
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.610
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
     
 0.598
AZIN2
Antizyme inhibitor 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
      
 0.597
KNTC1
Kinetochore associated 1.
      
 0.597
TMC8
Uncharacterized protein.
      
 0.592
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.