Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDE1Glycerophosphodiester phosphodiesterase 1. (331 aa)    
Predicted Functional Partners:
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
  
 0.755
NAPEPLD
N-acyl phosphatidylethanolamine phospholipase D.
      
 0.731
CRLS1
Cardiolipin synthase 1.
  
 0.720
MBOAT2
Membrane bound O-acyltransferase domain containing 2; Belongs to the membrane-bound acyltransferase family.
     
 0.674
ABHD4
Abhydrolase domain containing 4.
   
 
 0.653
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.624
DAGLB
Lipase_3 domain-containing protein.
      
 0.599
PLA2G4A
Phospholipase A2.
   
 
 0.583
MATN4
Matrilin 4.
    
 
 0.559
ABHD5
Abhydrolase domain containing 5.
   
 
 0.558
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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