STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM6Alpha-type protein kinase domain-containing protein. (763 aa)    
Predicted Functional Partners:
TRPM7
Transient receptor potential cation channel subfamily M member 7.
    
0.934
TRPM1
Transient receptor potential cation channel subfamily M member 1.
 
   
 0.901
G3UN58_LOXAF
LSDAT_euk domain-containing protein.
 
      0.899
TRPM3
Transient receptor potential cation channel subfamily M member 3.
 
   
 0.895
TRPC1
Transient receptor potential cation channel subfamily C member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.676
TIAM1
T cell lymphoma invasion and metastasis 1.
  
 
 
 0.602
TRPV2
Transient receptor potential cation channel subfamily V member 2; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.587
TRPC6
Transient receptor potential cation channel subfamily C member 6; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.571
TRPM8
Transient receptor potential cation channel subfamily M member 8.
 
   
 0.528
CLCN2
Chloride channel protein.
   
  
 0.525
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.