STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC40Leucine rich repeat containing 40. (609 aa)    
Predicted Functional Partners:
CNPY3
Canopy FGF signaling regulator 3.
    
 0.884
KCTD3
Potassium channel tetramerization domain containing 3.
    
  0.804
MRI1
Methylthioribose-1-phosphate isomerase 1; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.795
SMIM12
Small integral membrane protein 12.
   
 
 0.755
CNPY4
Canopy FGF signaling regulator 4.
    
 0.713
AAMDC
Adipogenesis associated Mth938 domain containing.
     
 0.661
SHKBP1
SH3KBP1 binding protein 1.
    
  0.659
ZC3H8
Zinc finger CCCH-type containing 8.
      
 0.648
BTBD8
BTB domain containing 8.
    
 0.631
TCAIM
T cell activation inhibitor, mitochondrial.
   
  
 0.630
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.