Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHG4Uncharacterized protein. (521 aa)    
Predicted Functional Partners:
G3SZZ6_LOXAF
Uncharacterized protein.
 
   
  0.911
KIAA1755
KIAA1755.
 
   
  0.815
MCF2L2
CRAL-TRIO domain-containing protein.
 
   
 0.776
PLA2G4A
Phospholipase A2.
   
 
 0.765
CDC42
Uncharacterized protein.
    
 0.741
RABIF
RAB interacting factor.
      
 0.734
SPTBN2
Spectrin beta chain; Belongs to the spectrin family.
    
 
 0.623
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.582
BEAN1
Brain expressed associated with NEDD4 1.
      
 0.570
SLAMF8
SLAM family member 8.
      
 0.541
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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