STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMTF1Cyclin D binding myb like transcription factor 1. (760 aa)    
Predicted Functional Partners:
CCDC59
Coiled-coil domain containing 59.
   
 
  0.834
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
 
 0.693
TAF1
Transcription initiation factor TFIID subunit.
    
 0.651
POLR1C
RNA polymerase I and III subunit C.
    
 0.592
POLR1E
RNA polymerase I subunit E.
    
 0.583
TDRD3
Tudor domain containing 3.
      
 0.581
TADA2A
Transcriptional adapter.
      
 0.577
RUNDC3B
RUN domain containing 3B.
      
 0.553
CD3EAP
CD3e molecule associated protein.
    
  0.535
ETS1
ETS proto-oncogene 1, transcription factor.
    
 
 0.532
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.