STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM243Transmembrane protein 243. (118 aa)    
Predicted Functional Partners:
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.569
TTYH2
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
      
 0.549
SLC35F6
Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter.
      
 0.546
PIP4P1
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
      
 0.517
TMEM179B
Transmembrane protein 179B.
      
 0.499
LMBRD1
LMBR1 domain containing 1.
      
 0.496
GINM1
Glycoprotein integral membrane 1.
      
 0.489
TMEM184C
Transmembrane protein 184C.
      
 0.467
CLCN4
Chloride channel protein.
      
 0.459
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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