STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC36Leucine rich repeat containing 36. (756 aa)    
Predicted Functional Partners:
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.509
ZSWIM7
Zinc finger SWIM-type containing 7.
      
 0.489
C11orf42
Chromosome 11 open reading frame 42.
  
     0.450
ODF1
Outer dense fiber of sperm tails 1.
  
     0.442
AGER
Advanced glycosylation end-product specific receptor.
  
     0.418
FAM186B
Family with sequence similarity 186 member B.
  
     0.403
ZSCAN20
Zinc finger and SCAN domain containing 20.
  
 
   0.403
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.