STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABTB1Ankyrin repeat and BTB domain containing 1. (478 aa)    
Predicted Functional Partners:
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.801
WDYHV1
WDYHV motif containing 1.
    
 
 0.580
EEF1D
Eukaryotic translation elongation factor 1 delta; Belongs to the EF-1-beta/EF-1-delta family.
    
 
 0.574
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.555
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.555
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
   
 0.555
IBTK
Inhibitor of Bruton tyrosine kinase.
   
 0.549
CARD19
Caspase recruitment domain family member 19.
      
 0.522
CARS1
Cysteinyl-tRNA synthetase.
    
   0.489
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.477
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.