STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN2Synapsin II. (579 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.832
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.772
G3UF18_LOXAF
C2 domain-containing protein.
   
 
 0.771
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.757
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.624
SNAP29
Synaptosome associated protein 29.
   
 0.624
VAMP8
Vesicle associated membrane protein 8.
   
 0.612
VAMP1
Vesicle associated membrane protein 1.
   
 0.610
STX1A
Syntaxin 1A.
   
 
 0.597
STX4
Syntaxin 4.
   
 
 0.596
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.