STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIMP4TIMP metallopeptidase inhibitor 4. (224 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
     
 0.713
MMP15
Matrix metallopeptidase 15.
    
 0.688
MMP9
Matrix metallopeptidase 9.
    
 0.674
MMP14
Matrix metallopeptidase 14.
    
 0.633
MMP8
Matrix metallopeptidase 8.
    
 0.630
HPX
Hemopexin.
    
 0.629
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
      
 0.621
MMP1
Matrix metallopeptidase 1.
    
 0.618
MMP27
Matrix metallopeptidase 27.
    
 0.600
FBN2
Fibrillin 2.
     
 0.573
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.