STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H8Zinc finger CCCH-type containing 8. (303 aa)    
Predicted Functional Partners:
ICE2
Interactor of little elongation complex ELL subunit 2.
     
 0.946
LARP7
La ribonucleoprotein domain family member 7.
   
 
 0.930
ICE1
Interactor of little elongation complex ELL subunit 1.
   
 
 0.899
WDR82
WD repeat domain 82.
   
 0.812
TUBA8
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.809
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
 
 0.808
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.739
SYMPK
Symplekin.
   
 0.727
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.727
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.724
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.