STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBPC1Myosin binding protein C, slow type. (1125 aa)    
Predicted Functional Partners:
WDR18
WD repeat domain 18.
   
 0.737
MYL1
Myosin light chain 1.
   
 0.633
NDEL1
NudE neurodevelopment protein 1 like 1.
    
 
 0.628
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.622
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 0.612
TNNC2
Troponin C2, fast skeletal type.
   
 0.610
TCAP
Titin-cap.
   
 0.603
NEB
Nebulin.
   
 0.599
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.597
KCNG4
Potassium voltage-gated channel modifier subfamily G member 4; Belongs to the potassium channel family.
   
 0.594
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.