STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYBPC1Myosin binding protein C, slow type. (1125 aa)    
Predicted Functional Partners:
MYBPC2
Myosin binding protein C, fast type.
   
 
  0.977
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.952
MYOZ1
Myozenin 1.
   
  
 0.947
NEB
Nebulin.
   
 0.935
MYOT
Myotilin.
   
  
 0.908
MYBPC3
Myosin binding protein C, cardiac.
     
  0.870
KLHL41
Kelch like family member 41.
   
 
 0.864
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.852
CPT2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
      
 0.772
NDEL1
NudE neurodevelopment protein 1 like 1.
    
 0.747
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.