STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPRTUracil phosphoribosyltransferase homolog. (306 aa)    
Predicted Functional Partners:
UCK1
Uridine-cytidine kinase 1.
 
 0.997
UCK2
Uridine-cytidine kinase 2.
 
 0.992
UCKL1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 0.962
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
  
   0.928
GDA
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
  
 
 0.719
PDCD11
Programmed cell death 11.
   
 
 0.714
EPHX2
Epoxide hydrolase 2.
    
 0.710
AMDHD1
Amidohydrolase domain containing 1.
  
 
 0.702
JUP
Junction plakoglobin.
  
 0.699
CTNNB1
Catenin beta 1.
  
 0.699
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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