STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAF12DDB1 and CUL4 associated factor 12. (453 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.986
G3T1T4_LOXAF
WD_REPEATS_REGION domain-containing protein.
     
 0.908
DCAF6
DDB1 and CUL4 associated factor 6.
     
 0.895
DCAF5
DDB1 and CUL4 associated factor 5.
    
 0.887
STRADB
STE20 related adaptor beta.
   
  
 0.872
DCAF11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
     
 0.815
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
     
 0.796
CCT5
Chaperonin containing TCP1 subunit 5.
    
 
 0.779
DCAF8
DDB1 and CUL4 associated factor 8.
     
 0.674
G3U723_LOXAF
WD_REPEATS_REGION domain-containing protein.
     
 0.674
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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