STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHYHPhytanoyl-CoA 2-hydroxylase. (334 aa)    
Predicted Functional Partners:
PEX7
Peroxisomal biogenesis factor 7.
    
 0.918
G3U3R0_LOXAF
Uncharacterized protein.
   
 
 0.808
CUNH6orf226
Uncharacterized protein.
    
   0.794
TYSND1
Trypsin domain containing 1.
     
 0.759
PEX5
Peroxisomal biogenesis factor 5.
     
 0.729
AGPS
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
   
 0.723
PHYHIP
Phytanoyl-CoA 2-hydroxylase interacting protein.
    
 
 0.705
PEX14
Peroxisomal biogenesis factor 14.
     
 0.700
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.682
WDR6
WD repeat domain 6.
      
 0.670
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (34%) [HD]