STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRFN1Leucine rich repeat and fibronectin type III domain containing 1. (765 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
    
 0.916
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
    
 0.597
G3T6D0_LOXAF
Uncharacterized protein.
    
 0.537
DLG1
Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.
    
 0.537
G3UJQ4_LOXAF
Uncharacterized protein.
    
 0.537
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
     
  0.507
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
      
 0.495
NPTX1
Neuronal pentraxin 1.
    
 
 0.480
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.450
FLOT2
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
     
 0.434
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.