STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOC2ADouble C2-like domain-containing protein. (401 aa)    
Predicted Functional Partners:
RPH3AL
Rabphilin 3A like (without C2 domains).
 
    
 0.896
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.578
RABEPK
Rab9 effector protein with kelch motifs.
      
 0.519
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.457
BTBD3
BTB domain containing 3.
      
 0.451
TUBGCP4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.448
RAB3C
RAB3C, member RAS oncogene family.
   
 
 0.442
RAB3A
RAB3A, member RAS oncogene family.
   
 
 0.442
RAB3B
RAB3B, member RAS oncogene family.
   
 
 0.442
RAB3D
RAB3D, member RAS oncogene family.
   
 
 0.442
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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