STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECDEcdysoneless cell cycle regulator. (643 aa)    
Predicted Functional Partners:
AAR2
AAR2 splicing factor.
    
 
 0.945
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.934
TSSC4
Tumor suppressing subtransferable candidate 4.
    
 
 0.934
EAPP
E2F associated phosphoprotein.
    
   0.927
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.844
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.827
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.813
PIH1D1
PIH1 domain containing 1.
    
 
 0.806
KIAA1143
KIAA1143.
    
   0.788
TTC27
Tetratricopeptide repeat domain 27.
    
   0.761
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.