STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECDEcdysoneless cell cycle regulator. (643 aa)    
Predicted Functional Partners:
AAR2
AAR2 splicing factor.
    
 
 0.901
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.819
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 
 0.800
TSSC4
Tumor suppressing subtransferable candidate 4.
    
 
 0.640
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.566
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
      
 0.536
ACD
ACD shelterin complex subunit and telomerase recruitment factor.
      
 0.528
CUNH6orf226
Uncharacterized protein.
      
 0.517
EAPP
E2F associated phosphoprotein.
    
   0.505
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.498
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.