STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADGRV1Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6308 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
    
 
 0.826
SLC26A5
Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.821
WHRN
Whirlin.
    
 
 0.815
LOXHD1
Lipoxygenase homology domains 1.
  
 
 
 0.782
SLC17A8
Solute carrier family 17 member 8.
   
  
 0.778
TMC1
Transmembrane channel-like protein.
    
 0.752
TTC8
Tetratricopeptide repeat domain 8.
      
 0.742
RPGRIP1L
RPGRIP1 like.
      
 0.738
USH1G
USH1 protein network component sans.
    
 
 0.738
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.738
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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