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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB7EF-hand calcium binding domain 7. (629 aa)    
Predicted Functional Partners:
IQCE
IQ motif containing E.
   
 0.888
EVC2
EvC ciliary complex subunit 2.
     
 0.676
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.652
DLG5
Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family.
    
 0.610
ST13
ST13 Hsp70 interacting protein.
    
 
 0.588
PGM5
Phosphoglucomutase 5; Belongs to the phosphohexose mutase family.
 
  
 
 0.585
CAPN15
Calpain 15; Belongs to the peptidase C2 family.
   
 
 0.557
PGM1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
 
  
 
 0.553
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
      
 0.551
G3TC70_LOXAF
Uncharacterized protein.
   
 0.525
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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