STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRC18Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
OSBPL6
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.690
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
    
 
 0.674
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
   
 
 0.660
FGFR3
Fibroblast growth factor receptor.
   
  0.593
NCAPH2
Non-SMC condensin II complex subunit H2.
      
 0.589
SEZ6L
Seizure related 6 homolog like.
    
 0.581
MTERF1
Mitochondrial transcription termination factor 1.
   
    0.507
MTERF2
Mitochondrial transcription termination factor 2.
   
    0.507
RANBP2
RAN binding protein 2.
    
 0.481
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.