STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMED6GOLD domain-containing protein. (240 aa)    
Predicted Functional Partners:
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.829
CEP76
Centrosomal protein 76.
      
 0.829
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.814
QPCTL
Glutaminyl-peptide cyclotransferase like.
      
 0.811
G3UH06_LOXAF
Uncharacterized protein.
   
  
 0.760
TRABD
TraB domain containing.
      
 0.737
NUDT22
Nudix hydrolase 22.
      
 0.710
TANGO6
Transport and golgi organization 6 homolog.
      
 0.680
WDYHV1
WDYHV motif containing 1.
      
 0.642
CENPN
Centromere protein N.
      
 0.636
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.