STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCC9ATP binding cassette subfamily C member 9. (1548 aa)    
Predicted Functional Partners:
KCNJ11
Potassium voltage-gated channel subfamily J member 11.
   
 0.994
KCNJ8
Potassium voltage-gated channel subfamily J member 8.
   
 0.985
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.877
ABCC8
ATP binding cassette subfamily C member 8.
  
0.802
NUDCD1
NudC domain containing 1.
    
   0.764
RAPGEF3
Rap guanine nucleotide exchange factor 3.
    
 0.685
KCNJ6
Potassium voltage-gated channel subfamily J member 6.
   
 0.609
PRKACB
Protein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily.
   
 0.607
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha; Belongs to the protein kinase superfamily.
   
 0.607
PITRM1
Pitrilysin metallopeptidase 1.
   
 
 0.519
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.