Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A8Solute carrier family 22 member 8. (562 aa)    
Predicted Functional Partners:
G3SYF4_LOXAF
MFS domain-containing protein.
   
 
 0.566
G3UA22_LOXAF
MFS domain-containing protein.
   
 
 0.566
SV2B
Synaptic vesicle glycoprotein 2B.
  
    0.491
SLC17A4
Solute carrier family 17 member 4.
  
 
 0.473
SV2A
Synaptic vesicle glycoprotein 2A.
  
    0.472
SV2C
Synaptic vesicle glycoprotein 2C.
  
    0.464
SLC17A2
Solute carrier family 17 member 2.
  
 
 0.457
INTS1
Integrator complex subunit 1.
    
 0.452
INTS9
Integrator complex subunit 9.
    
 0.446
INTS11
Integrator complex subunit 11.
    
 0.443
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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