STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SV42_LOXAFACB domain-containing protein. (331 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
    
 
 0.761
VAPB
VAMP associated protein B and C.
    
 
 0.753
ZFPL1
Zinc finger protein like 1.
    
 
 0.667
AGPS
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
    
 
 0.633
PEX19
Uncharacterized protein.
     
 0.625
ATAD1
ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.
   
 
 0.619
PEX13
Peroxisomal biogenesis factor 13.
   
 0.595
ABCB10
ATP binding cassette subfamily B member 10.
    
 
 0.591
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
     
 0.587
CHST8
Carbohydrate sulfotransferase.
      
 0.585
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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