STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SV42_LOXAFACB domain-containing protein. (331 aa)    
Predicted Functional Partners:
PEX14
Peroxisomal biogenesis factor 14.
   
 0.635
PEX16
Peroxisomal membrane protein PEX16.
   
 0.584
PEX3
Peroxisomal biogenesis factor 3.
    
 0.565
PEX13
Peroxisomal biogenesis factor 13.
   
 0.562
PEX19
Uncharacterized protein.
     
 0.549
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
     
 0.548
ABCD3
ATP binding cassette subfamily D member 3.
   
 
 0.539
ATAD1
ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.
   
 
 0.537
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.532
PXMP2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
 
 0.525
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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