STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D25TBC1 domain family member 25. (648 aa)    
Predicted Functional Partners:
RAB33B
RAB33B, member RAS oncogene family.
     
 0.923
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.900
RAB33A
RAB33A, member RAS oncogene family.
     
 0.894
GABARAP
GABA type A receptor-associated protein.
   
 0.772
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.772
G3TQR5_LOXAF
Uncharacterized protein.
   
 0.772
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
      
 0.668
MAP1LC3B
Uncharacterized protein.
   
 0.647
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
   
 0.647
EBPL
EBP like.
      
 0.625
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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