STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP18USP domain-containing protein; Belongs to the peptidase C19 family. (374 aa)    
Predicted Functional Partners:
ISG15
ISG15 ubiquitin like modifier.
   
 0.987
DHX58
DExH-box helicase 58.
   
 
 0.905
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.894
IFNAR2
Uncharacterized protein.
    
 0.891
DDX58
DExD/H-box helicase 58.
   
 
 0.880
IFI44L
Interferon induced protein 44 like.
   
  
 0.858
G3TXK1_LOXAF
zf-3CxxC domain-containing protein.
   
  
 0.827
IFIH1
Interferon induced with helicase C domain 1.
   
 
 0.822
CMPK2
Cytidine/uridine monophosphate kinase 2.
   
  
 0.766
OASL
2'-5'-oligoadenylate synthetase like.
   
 0.765
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.