STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP18USP domain-containing protein; Belongs to the peptidase C19 family. (374 aa)    
Predicted Functional Partners:
IFNAR2
Uncharacterized protein.
    
 0.989
ISG15
ISG15 ubiquitin like modifier.
   
 0.979
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.943
DDX58
DExD/H-box helicase 58.
   
 
 0.935
STAT2
Signal transducer and activator of transcription.
   
 0.922
SKP2
S-phase kinase associated protein 2.
    
 
 0.900
TAB1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
   
 0.888
MAP3K7
Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
    
 0.884
STAT1
Signal transducer and activator of transcription.
   
 0.868
G3TXK1_LOXAF
zf-3CxxC domain-containing protein.
   
  
 0.850
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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