STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT1Scm like with four mbt domains 1. (865 aa)    
Predicted Functional Partners:
RYBP
RING1 and YY1 binding protein.
    
 0.631
YAF2
YY1 associated factor 2.
    
 0.631
EED
Embryonic ectoderm development.
   
 0.506
CHD9
Chromodomain helicase DNA binding protein 9.
   
 0.486
RCOR1
REST corepressor 1.
   
 0.465
RING1
Ring finger protein 1.
    
 0.432
RNF2
RING-type domain-containing protein.
    
 0.432
G3UB93_LOXAF
RAWUL domain-containing protein.
    
 0.432
PCGF5
Polycomb group ring finger 5.
   
 0.420
PCGF3
Polycomb group ring finger 3.
   
 0.412
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.