STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLINT1Clathrin interactor 1. (641 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
    
 0.989
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 
 0.954
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 
 0.724
PUM1
Pumilio RNA binding family member 1.
   
 
 0.673
SH3D19
SH3 domain containing 19.
     
 0.668
AP1B1
AP complex subunit beta.
    
 0.659
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 0.612
PUM2
Pumilio RNA binding family member 2.
   
 
 0.610
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.586
PIK3C2A
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
    
 0.561
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.