STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPM1Uncharacterized protein; Belongs to the tropomyosin family. (326 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
   
 0.905
TNNT2
Troponin T2, cardiac type.
   
 0.895
ACTC1
Actin alpha cardiac muscle 1.
   
 0.834
TNNI1
Troponin I1, slow skeletal type.
   
 0.803
MYL1
Myosin light chain 1.
   
 0.781
TNNI2
Troponin I2, fast skeletal type.
   
 0.745
TNNT3
Troponin T3, fast skeletal type.
   
 0.733
TNNT1
Troponin T1, slow skeletal type.
   
 0.733
ACTN4
Actinin alpha 4.
   
 0.720
TFG
Trafficking from ER to golgi regulator.
   
 0.712
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.