STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PON1Paraoxonase 1. (356 aa)    
Predicted Functional Partners:
PON3
Paraoxonase 3.
   
  0.840
PON2
Paraoxonase 2.
   
  0.840
NFYC
Nuclear transcription factor Y subunit gamma.
    
   0.786
CETP
Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.
     
 0.761
APOA2
Apolipoprotein A2.
   
 
 0.738
LCAT
Lecithin-cholesterol acyltransferase.
   
 
 0.733
APOE
Apolipoprotein E.
   
 
 0.723
APOB
Apolipoprotein B.
   
 
 0.703
APOM
Apolipoprotein M.
   
 
 0.699
CLU
Clusterin; Belongs to the clusterin family.
    
 0.696
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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