STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (326 aa)    
Predicted Functional Partners:
TADA3
Transcriptional adaptor 3.
    
 0.996
TAF12
TATA-box binding protein associated factor 12.
    
 0.995
SGF29
SAGA complex associated factor 29.
    
 0.995
TAF10
Uncharacterized protein.
    
 0.992
TAF6
TATA-box binding protein associated factor 6.
    
 0.988
TADA2A
Transcriptional adapter.
    
 0.984
SUPT7L
SPT7 like, STAGA complex gamma subunit.
    
 0.971
TAF6L
TATA-box binding protein associated factor 6 like.
    
 0.970
TAF5L
TATA-box binding protein associated factor 5 like.
    
 0.962
ENY2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...]
    
 0.959
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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