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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TULP3Tubby-like protein; Belongs to the TUB family. (467 aa)    
Predicted Functional Partners:
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.845
IFT122
Intraflagellar transport 122.
   
 0.815
WDR19
WD repeat domain 19.
    
 0.738
WDR35
WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking.
    
 0.724
GPR161
G protein-coupled receptor 161.
     
 0.697
IFT140
Uncharacterized protein.
    
 0.682
G3UL58_LOXAF
WD_REPEATS_REGION domain-containing protein.
    
 0.682
IFT43
Uncharacterized protein.
    
 
 0.635
IFT88
Intraflagellar transport 88.
    
 
 0.560
ARL13B
ADP ribosylation factor like GTPase 13B.
   
  
 0.553
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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