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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3GLCTBeta 3-glucosyltransferase. (446 aa)    
Predicted Functional Partners:
SPON1
Spondin 1.
     
 0.750
G3STH0_LOXAF
Uncharacterized protein.
 
      0.706
POFUT2
Protein O-fucosyltransferase 2.
      
 0.697
NELFB
Negative elongation factor complex member B.
   
 0.661
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.587
ACBD6
Acyl-CoA binding domain containing 6.
      
 0.587
TMEM53
Transmembrane protein 53.
      
 0.587
ADAMTSL4
ADAMTS like 4.
     
 0.577
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.571
ADAMTS9
ADAM metallopeptidase with thrombospondin type 1 motif 9.
    
 0.554
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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