STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF280DUncharacterized protein. (977 aa)    
Predicted Functional Partners:
PHF20L1
PHD finger protein 20 like 1.
   
 0.639
RNF216
Ring finger protein 216.
    
 
 0.532
ZMYM3
Zinc finger MYM-type containing 3.
   
 0.526
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.507
AFG1L
AFG1 like ATPase.
      
 0.443
DTNBP1
Uncharacterized protein.
      
 0.439
KDM5A
Lysine demethylase 5A.
    
 0.436
WDR70
WD repeat domain 70.
      
 0.432
SYBU
Syntabulin.
  
  0.426
ZMYM4
Zinc finger MYM-type containing 4.
   
 0.425
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.