STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACTR1AActin related protein 1A. (376 aa)    
Predicted Functional Partners:
DCTN2
Dynactin subunit 2.
   
 0.980
DCTN1
CAP-Gly domain-containing protein.
   
 0.967
DCTN6
Dynactin subunit 6.
    
 0.963
DCTN4
Dynactin subunit 4.
   
 0.959
DCTN3
Dynactin subunit 3.
    
 0.958
DCTN5
Dynactin subunit 5.
   
 0.955
ACTR10
Actin related protein 10; Belongs to the actin family.
   
 0.955
DYNC1I2
Dynein cytoplasmic 1 intermediate chain 2.
    
 0.847
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
   
 0.840
TUBA8
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.835
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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