STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SVH3_LOXAFUncharacterized protein. (310 aa)    
Predicted Functional Partners:
CFAP54
Uncharacterized protein.
 
      0.900
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.646
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.558
HYDIN
HYDIN axonemal central pair apparatus protein.
   
 
 0.555
CFAP221
Cilia and flagella associated protein 221.
    
 
 0.526
SPEF2
Sperm flagellar 2.
   
 
 0.515
CFAP47
Uncharacterized protein.
   
 
 0.493
CCDC189
Coiled-coil domain containing 189.
    
 
 0.490
RCL1
RNA terminal phosphate cyclase like 1.
      
 0.479
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.467
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.