Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D1TBC1 domain family member 1. (1167 aa)    
Predicted Functional Partners:
RAB14
RAB14, member RAS oncogene family.
    
 0.917
RAB10
RAB10, member RAS oncogene family.
    
 0.911
PRKAA1
Non-specific serine/threonine protein kinase.
    
 0.903
PRKAA2
Non-specific serine/threonine protein kinase.
    
 0.899
RAB11B
RAB11B, member RAS oncogene family.
    
 0.895
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
 0.894
RAB2A
RAB2A, member RAS oncogene family.
    
 0.894
PRKAG3
Protein kinase AMP-activated non-catalytic subunit gamma 3.
    
 0.893
RAB8B
RAB8B, member RAS oncogene family.
    
 0.891
RAB8A
RAB8A, member RAS oncogene family.
    
 0.891
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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