STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLAMF7SLAM family member 7. (336 aa)    
Predicted Functional Partners:
SH2D1A
SH2 domain containing 1A.
   
 0.823
G3U7I1_LOXAF
Ig-like domain-containing protein.
   
 0.809
CD2
CD2 molecule.
   
 0.659
GPR84
G protein-coupled receptor 84.
   
  
 0.566
FANCM
FA complementation group M.
   
 0.512
SPG21
SPG21 abhydrolase domain containing, maspardin.
      
 0.490
SLAMF1
Ig-like domain-containing protein.
   
  
0.480
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.480
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.472
DDX20
DEAD-box helicase 20; Belongs to the DEAD box helicase family.
   
 0.459
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.