STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK2Uroplakin 2. (184 aa)    
Predicted Functional Partners:
UPK1A
Tetraspanin.
  
 
 0.980
UPK1B
Uroplakin 1B; Belongs to the tetraspanin (TM4SF) family.
  
 
 0.935
UPK3A
Uroplakin 3A.
   
 
 0.924
UPK3B
Uroplakin 3B.
      
 0.737
RBP5
Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.618
HOXB8
Homeobox B8.
    
 0.581
STOML1
Stomatin like 1.
    
 
 0.556
RNF26
Ring finger protein 26.
    
 
 0.554
G3U441_LOXAF
Fork-head domain-containing protein.
      
 0.542
SLC37A4
Solute carrier family 37 member 4.
      
 0.534
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.