STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUSD4Sushi domain containing 4. (490 aa)    
Predicted Functional Partners:
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.656
SEL1L3
SEL1L family member 3.
      
 0.612
G3T2H2_LOXAF
Uncharacterized protein.
      
 0.592
CDK17
Cyclin dependent kinase 17.
   
  
 0.577
BCAS3
BCAS3 microtubule associated cell migration factor.
      
 0.550
ZNF407
C2H2-type domain-containing protein.
      
 0.488
G3U5H9_LOXAF
Uncharacterized protein.
      
 0.488
G3UA12_LOXAF
Uncharacterized protein.
      
 0.488
CDK16
Cyclin dependent kinase 16; Belongs to the protein kinase superfamily.
   
  
 0.429
SLC25A48
Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.401
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.