STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin subfamily member 10. (277 aa)    
Predicted Functional Partners:
COLEC11
Collectin subfamily member 11.
  
0.856
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
    
 0.718
MASP1
Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
    
 0.637
G3T2A5_LOXAF
Uncharacterized protein.
  
 
 0.596
COL22A1
Uncharacterized protein.
  
 
 0.582
SFTPD
Surfactant protein D.
  
 
0.541
C1QC
Complement C1q C chain.
  
 0.537
COL23A1
Collagen type XXIII alpha 1 chain.
  
 
  0.532
OTOL1
C1q domain-containing protein.
  
     0.532
G3ULL0_LOXAF
Uncharacterized protein.
  
 
  0.524
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.