STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D32TBC1 domain family member 32. (1298 aa)    
Predicted Functional Partners:
FAM149B1
Family with sequence similarity 149 member B1.
    
 
 0.931
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.908
G3UNS7_LOXAF
Uncharacterized protein.
   
  
 0.831
FOXJ1
Forkhead box J1.
    
 
 0.696
FAM149A
Family with sequence similarity 149 member A.
    
 
 0.673
FAT4
FAT atypical cadherin 4.
      
 0.664
DNAH11
Dynein axonemal heavy chain 11.
    
 
 0.644
MKS1
MKS transition zone complex subunit 1.
      
 0.631
EPO
Erythropoietin.
      
 0.626
PHF12
PHD finger protein 12.
      
 0.567
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.