Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WFDC1WAP four-disulfide core domain 1. (214 aa)    
Predicted Functional Partners:
HTRA3
HtrA serine peptidase 3.
      
 0.523
WFDC13
Uncharacterized protein.
      
 0.504
SDCBP
Syndecan binding protein.
      
 0.500
SDCBP2
Syndecan binding protein 2.
      
 0.500
SCG5
Secretogranin V.
      
 0.488
IVNS1ABP
Influenza virus NS1A binding protein.
      
 0.467
SULF1
Sulfatase 1.
      
 0.466
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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