Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM9Transmembrane protein 9. (183 aa)    
Predicted Functional Partners:
TMEM9B
TMEM9 domain family member B.
   
   0.938
TMEM214
Transmembrane protein 214.
      
 0.829
PTDSS2
Phosphatidylserine synthase 2.
      
 0.816
CLCN4
Chloride channel protein.
    
 
 0.806
TMEM53
Transmembrane protein 53.
      
 0.795
CLCN5
Chloride channel protein.
    
 
 0.791
DTD2
D-aminoacyl-tRNA deacylase 2.
      
 0.690
OGFOD3
2-oxoglutarate and iron dependent oxygenase domain containing 3.
      
 0.668
GPAT4
Glycerol-3-phosphate acyltransferase 4.
   
  
 0.654
RBM42
RNA binding motif protein 42.
      
 0.641
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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